Publications
Our objective is to create a suite of software solutions that enable the complex
tasks in which life science professionals and biomedical researchers engage towards
the discovery and evaluation of new treatments, our research efforts yielded highly
innovative techniques which is evidenced in the form of peer-reviewed publications
and posters:
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Yves R. Jean-Mary, E. Patrick Shironoshita, Mansur R. Kabuka: "ASMOV: Results for OAEI 2010," 5th International Workshop
on Ontology Matching (OM 2010), Shanghai, China.
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Yves R. Jean-Mary, E. Patrick Shironoshita, Mansur R. Kabuka: "ASMOV: Results for OAEI 2009," 4th International Workshop
on Ontology Matching (OM 2009), Chantilly, VA, USA.
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Yves R. Jean-Mary, E. Patrick Shironoshita, Mansur R. Kabuka: "Ontology matching
with semantic verification," Journal of Web Semantics, vol. 7, no. 3, pp 235-251,
September 2009,
doi:10.1016/j.websem.2009.04.001.
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E. Patrick Shironoshita, Yves R. Jean-Mary, Ray M. Bradley, Mansur R. Kabuka, "semQA:
SPARQL with Idempotent Disjunction," IEEE Transactions on Knowledge and Data Engineering,
vol. 21, no. 3, pp. 401-414, March 2009, doi:10.1109/TKDE.2008.91.
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E. Patrick Shironoshita, Yves R. Jean-Mary , Ray M. Bradley and Mansur R. Kabuka:
"semCDI: a query formulation for semantic data integration in caBIG".
Journal of the American Medical Informatics Association (JAMIA), vol. 15, no. 4,
pp 559-568, July-August 2008,
doi:10.1197/jamia.M2732.
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E. Patrick Shironoshita, Ray M. Bradley, Yves R. Jean-Mary, Thomas J. Taylor, Michael
T. Ryan, Mansur R. Kabuka: "Semantic Representation and Querying of caBIG Data
Services," Data Integration in the Life Sciences, Springer Berlin/Heidelberg,
June 2008, pp 108-115,
doi:10.1007/978-3-540-69828-9_10.
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Yves R. Jean-Mary, Mansur R. Kabuka: "ASMOV: Results for OAEI 2008," 3rd International Workshop
on Ontology Matching (OM 2008), Karlsruhe, Germany.
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E. Patrick Shironoshita, Michael T. Ryan, Mansur R. Kabuka: "Cardinality estimation
for the optimization of queries on ontologies," ACM SIGMOD Record, vol. 36,
no. 2, pp 13-18, June 2007,
doi:10.1145/1328854.1328856.
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Yves R. Jean-Mary, Mansur R. Kabuka. "ASMOV: Ontology Alignment with Semantic Validation".
Joint SWDB-ODBIS Workshop, September 2007, Vienna, Austria, 15-20.
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Yves R. Jean-Mary, E. Patrick Shironoshita, Thomas J. Taylor, Michael T. Ryan, Ray
M. Bradley , Mansur R. Kabuka: "Ontology Alignment with Semantic Validation:
A Comparison using UMLS Metathesaurus and WordNet". IEEE 7th International
Symposium on Bioinformatics and Bioengineering, 2007.
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Yves R. Jean-Mary, Mansur R. Kabuka: "ASMOV: Results for OAEI 2007," 2nd International Workshop
on Ontology Matching (OM 2007), Busan, Korea.
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Thomas J. Taylor, Mansur R. Kabuka, E. Patrick Shironoshita, Michael T. Ryan, Akmal
A. Younis, Nigel M. John, John R. McQuaid, M. H. Trivedi, G. W. Currier, R. A. McKinney,
B. D. Grannemann, C. Claassen: "Viability of Mental Health Assessment Software
in Diverse Settings". 45th Annual NCDEU (New Clinical Drug Evaluation Unit),
Boca Raton, Florida, June 6-9, 2005.
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